Publications

Preprints

Vorselen, D.*, Kamber, R.A.*, Labitigan, R.L.D., van Loon, A.P., Peterman, E., Delgado, M.K., Lin, S., Rasmussen, J.P., Bassik, M.C.#, Theriot, J.A#. Cell surface receptors TREM2, CD14 and integrin αMβ2 drive sinking engulfment in phosphatidylserine-mediated phagocytosis. bioRxiv.

Tycko, J., Van, M., Aradhana, DelRosso, N., Yao, D., Xu, X., Ludwig, C., Spees, K., Liu, K., Hess, G.T., Gu, M., Mukund, A.X., Suzuki, P.H., Kamber, R.A., Qi,  L.S., Bintu, L.#, Bassik, M.C#. Development of compact transcriptional effectors using high-throughput measurements in diverse contexts. bioRxiv.

Published work

Amaya, L., Abe, B., Liu, J., Zhao, F., Zhang, W.L., Chen, R., Li, R., Wang, S., Kamber, R.A., Tsai, M.C., Bassik, M.C., Majeti, R., Chang, H. 2024. Pathways for macrophage uptake of cell-free circular RNAs. Molecular Cell, 84(11).

Ahn, G., Riley, N., Kamber, R.A., Wisnovsky, S., Moncayo von Hase, S., Bassik, M.C., Banik, S.M. and Bertozzi, C.R., 2023. Elucidating the cellular determinants of targeted membrane protein degradation by lysosome-targeting chimeras. Science, 382(6668).

Chen, Y., Craven, G.B., Kamber, R.A., Cuesta, A., Zhersh, S., Moroz, Y.S., Bassik, M.C. and Taunton, J., 2023. Direct mapping of ligandable tyrosines and lysines in cells with chiral sulfonyl fluoride probes. Nature Chemistry, pp.1-10.

Kamber, R.A., Nishiga, Y., Morton, B., Banuelos, A.M., Barkal, A.M., Vences-Catalan, F., Gu, M., Fernandez, D, Seoane, J.A., Yao, D., Liu, K., Lin, S., Spees, K, Curtis, C., Jerby-Arnon, L., Weissman, I.L., Sage, J., Bassik, M.C., 2021. Inter-cellular CRISPR screens reveal regulators of cancer cell phagocytosis. Nature, 597(7877), pp.549-554.

Wainberg, M.*, Kamber, R.A.*, Balsubramani, A.*, Meyers, R.M., Sinnott-Armstrong, N., Hornburg, D., Jiang, L., Chan, J., Jian, R., Gu, M., Shcherbina, A., Dubreuil, M.M., Meuleman, W., Spees, K., Snyder, M.P., Bassik, M.C.#, Kundaje, A.#, 2021. A genome-wide atlas of co-essential modules assigns function to uncharacterized genes. Nature Genetics, 53(5), pp.638-649.

Han, K., Pierce, S.E., Li, A., Spees, K., Anderson, G.R., Seoane, J.A., Lo, Y.H., Dubreuil, M., Olivas, M., Kamber, R.A., Wainberg, M., Kostyrko, K., Kelly, M.R., Yousefi, M., Simpkins, S.W., Yao, D., Lee, K., Kuo, C.J., Jackson, P.K., Sweet-Cordero, A., Kundaje, A., Gentles, A.J., Curtis, C., Winslow, M.M., Bassik, M.C., 2020. CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities. Nature, 580(7801), pp.136-141.

Haney, M.*, Bohlen, C.*#, Morgens, D., Ousey, J., Barkal, A., Tsui, K., Ego, B., Levin, R., Kamber, R.A., Collins, H., Tucker, A., Li, A., Vorselen, D., Labitagan, L., Crane, E., Boyle, E., Jiang, L., Chan, J., Rincon, E., Greenleaf, W., Li, B., Snyder, M., Weissman, I., Theriot, J., Collins, S., Barres, B., Bassik, M.#. 2018. Identification of phagocytosis regulators using magnetic genome-wide CRISPR screens. Nature Genetics, 50(12), pp.1716-1729.

Weir, N.R., Kamber, R.A., Martenson, J.S. and Denic, V., 2017. The AAA protein Msp1 mediates clearance of excess tail-anchored proteins from the peroxisomal membrane. eLife, 6, e28507.

Eapen, V.V, Waterman, D.P., Bernard, A, Schiffman, N., Sayas, E., Kamber, R.A., Lemos, B., Memisoglu, G., Ang, J., Mazella, A., Chuartzman, S.G., Loewith, R., Schuldiner, M., Denic, V., Klionsky, D.J., Haber, J., 2017. A novel pathway of targeted autophagy is induced by DNA damage in budding yeast. PNAS, 114(7), pp.E1158-E1167.

Kamber, R.A.*, Shoemaker, C.J.* and Denic, V., 2015. Receptor-bound targets of selective autophagy use a scaffold protein to activate the Atg1 kinase. Molecular Cell, 59(3), pp.372-381.

Kamber, R.A.*, Shoemaker, C.J.* and Denic, V., 2015. A molecular switch for selective autophagosome formation. Autophagy, 11(11), pp.2132-2133. Perspective.

Valenzano, D.R., Kirschner, J., Kamber, R.A., Zhang, E., Weber, D., Cellerino, A., Englert, C., Platzer, M., Reichwald, K. and Brunet, A., 2009. Mapping loci associated with tail color and sex determination in the short-lived fish Nothobranchius furzeri. Genetics, 183(4), pp.1385-1395.

*Equal contribution

#Co-corresponding authors